BehaviorAtlas MultiBehavior · Software Suite

Multi-behavior Analysis · Software Suite

Fine multi-behavior quantification for single subjects — markerless 3D capture, supervised behavior recognition, and model-driven behavior spectrum analysis, with dedicated hardware, software, and algorithms for single mouse and single pig.

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Analysis Subjects

Built on a unified multi-behavior analysis methodology — dedicated hardware, software platforms, and algorithms for single mouse and single pig. Select a subject to view its technical configuration.

Software Functions

BehaviorAtlas Capture and BehaviorScope — multi-camera sync capture, TTL event sync, scene calibration, project management, 3D reconstruction, supervised behavior recognition, and export; configurable for single mouse and single pig.

Capture

Multi-camera Sync Capture

Multi-channel visible-light synchronized recording with one-click capture — time-aligned multi-view video for single mouse (4–6 cameras) and single pig (9-view) setups.

Capture

TTL Event Sync

TTL event markers and external trigger sync — precise alignment of behavior event timestamps with multi-camera video for downstream analysis.

Capture

Auto-record After Acclimation

Set a mouse acclimation period — multi-camera recording starts automatically when it ends, reducing manual intervention and timing gaps.

Capture

Recording & Metadata

Experiment info, sample naming, and recording parameters — structured output to the project data folder as the foundation for tracking, reconstruction, and analysis.

Capture

Multi-camera Calibration

Checkerboard calibration for intrinsics/extrinsics, multi-camera alignment, and behavior event timestamps for accurate 3D fusion.

Analyzer

Supervised Behavior Recognition

Pre-trained models and supervised clustering identify and quantify behavior modules per model configuration — Supervised_paras segment and label outputs for fine multi-behavior analysis.

Analyzer

3D Skeleton Reconstruction

Fuses multi-view 2D tracking with calibration to reconstruct frame-by-frame 3D skeletons — csv and c3d coordinate outputs for downstream behavior recognition.

Analyzer

Built-in Default Models

Standard body-tracking and behavior-recognition models built in — follow the standard experimental workflow with no extra annotation, training, or custom model development in most cases.

Analyzer

Project & Data Management

Create and manage analysis projects with structured folders — data, 3Dskeleton, BeAOutputs, and results_export for traceable sample and output management.

Analyzer

2D Keypoint Tracking

Pre-trained networks detect and track body keypoints in single-view video, outputting per-frame 2D trajectories for 3D reconstruction.

Analyzer

Kinematic Parameter Computation

Automatic frame-level (FrameLevel_paras) and advanced kinematic parameters (AdvancedParameters) from 3D skeletons and behavior sequences.

Analyzer

Sync Replay & QC

Synchronously compare multi-camera video with 3D skeleton reconstruction — frame-by-frame QC for occlusion, dropouts, and calibration issues.

Analyzer

Visualization & Export

Behavior spectra, timelines, proportions, and group comparisons — one-click export of tables, figures, and videos to results_export.

Software Matrix

Capture and BehaviorScope — acquisition plus data analysis and visualization. Select a subject to explore its dedicated stack.

BehaviorAtlas Capture · Single Mouse
Capture

4–6 cams

Camera sync

50×50

cm arena

Multi-channel visible-light sync recording with TTL events and scene calibration — one-click recording.

BehaviorAtlas Capture · Single Mouse

Multi-camera acquisition software

BehaviorAtlas BehaviorScope · Single Mouse
Analysis

16+

Body keypoints

Supervised

Behavior recognition

AI keypoint detection, 3D skeleton reconstruction, and model-driven behavior spectra via supervised clustering — multi-dimensional visualization and one-click export.

BehaviorAtlas BehaviorScope · Single Mouse

Data analysis & visualization software

Analysis Workflow

Single-mouse workflow — calibration and capture through tracking QA, then batch analysis or a PoseLabeler custom-model path.

01

Camera Calibration

Checkerboard calibration for intrinsics/extrinsics and multi-camera alignment — the geometric foundation for 3D reconstruction.

Camera Calibration
02

Multi-camera Sync Capture

BehaviorAtlas Capture — multi-channel visible-light sync recording with TTL markers and experiment metadata.

Multi-camera Sync Capture
03

Import into Analysis Software

Import captured video, calibration files, and experiment metadata into a BehaviorScope project for unified analysis.

Import into Analysis Software
04

Tracking Model Test

Test preset or custom tracking models on sample clips — evaluate keypoint accuracy and stability before full-batch analysis.

Tracking Model Test
05

Batch Per-view Body Tracking

Batch body-keypoint tracking per camera view — high-precision 2D trajectories as input for 3D reconstruction.

Batch Per-view Body Tracking
06

3D Reconstruction

Multi-view fusion reconstructs 3D skeleton sequences for frame-by-frame pose data and downstream behavior analysis.

3D Reconstruction
07

Behavior Recognition

Run built-in or custom behavior recognition models to extract and quantify behavior modules with labeled segments.

Behavior Recognition
08

Results Viewing & Visualization

Review recognized behavior modules — explore spectra, timelines, statistical charts, and export publication-ready outputs.

Results Viewing & Visualization

When behavior recognition results are unsatisfactory

Annotate, train a custom model, then re-run recognition.

Behavior Annotation & Training

Annotate behavior segments in BehaviorScope and train a custom recognition model for your paradigm and phenotypes.

Behavior Annotation & Training

When tracking test results are unsatisfactory

If preset or custom tracking models show poor accuracy or stability on samples, annotate → train → import, then return to Tracking Model Test to re-validate.

PoseLabeler Body-point Annotation

Use our free PoseLabeler for efficient frame-level body-keypoint annotation and quality review.

PoseLabeler Body-point Annotation
About PoseLabeler

Tracking Model Training

Train a custom body-keypoint tracking model from annotations — tailored to species, views, and setup.

Tracking Model Training

Import Model into BehaviorScope

Import the trained tracking model into BehaviorScope, then return to the tracking model test step to re-validate before continuing.

Import Model into BehaviorScope

Analysis Results

Single mouse — built-in default behavior models, frame-by-frame QC, data export, and visualization for standardized multi-behavior experiments.

Default Behavior Recognition Model

01

Default Behavior Recognition Model

Default model Multi-behavior Ready to use

The built-in default model covers common mouse behaviors including moving forward, left turning, right turning, jumping, climbing, rearing, hunching, self-grooming, immobility, and sniffing — use it directly when your study focuses on these modules.

Data Review & Frame-by-frame QC

02

Data Review & Frame-by-frame QC

QC Frame-by-frame Multi-layer review

Review data frame by frame — kinematic parameters, 3D reconstruction, body-point tracking, and behavior recognition — to assess quality and flag anomalous segments.

Behavior Data Export

03

Behavior Data Export

Export Custom Groups

Export behavior recognition results and related parameters for custom statistics, group comparisons, and downstream analysis inside or outside the software.

Visualization & Chart Export

04

Visualization & Chart Export

Visualization Charts Export

Built-in visualization for behavior spectra, timelines, transition matrices, and more — analyze and export publication-ready figures and reports in one click.

Get a Product Demo

Book an online or on-site demo — experience the full workflow with tailored protocol advice.

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