BehaviorAtlas EyeTracking

Mouse Eye Tracking System

Industry-leading lightweight mouse eye tracking: 1g mobile headset, up to 1000 fps fixed version. AI pupil detection and publication-grade visualization for neuroscience research.

Mobile Mouse Eye Tracking System
Mobile

Lightest 1g headset

Fixed Mouse Eye Tracking System
Fixed

Up to 1000 fps

Product Features

AI pupil detection × lightweight hardware × full automation — breaking traditional limits in small-animal eye tracking.

AI

AI Pupil Detection Algorithm

Advanced AI precisely tracks pupil dynamics, overcoming noise from complex lighting, blinks, and large eye movements for accurate, reliable data.

AI Pupil Detection Algorithm
Lightweight

Ultra-miniature ETU Sensor

Among the world's lightest mobile eye-tracking systems — head-mounted recorder weighs only 1 g with built-in infrared illumination for stable imaging in low light.

Ultra-miniature ETU Sensor
Freely-moving

Freely-moving Mouse Eye-tracking

Beyond traditional head-fixation — suitable for freely-moving mice with minimal impact on natural exploratory behavior.

Freely-moving Mouse Eye-tracking
High precision

Head-fixed Version up to 1000 fps

Head-fixed system records up to 1000 fps, capturing subtle eye movements with synchronized behavioral camera recording.

Head-fixed Version up to 1000 fps
Multi-modal sync

Pupil-Behavior Sync & Multi-device Integration

Universal TTL interface for I/O synchronization — compatible with optogenetics, two-photon, electrophysiology, fiber photometry, and other multimodal neural recording and modulation.

Pupil-Behavior Sync & Multi-device Integration
Convenient

Detachable Design

User-friendly design — 0.4 g ETU connector implanted on skull, easy attach/detach, reusable, and protected from cage damage.

Detachable Design
Metrics

Rich Eye-tracking Metrics

100+ metrics including pupil diameter, position, area, movement speed, saccade count/amplitude/velocity/duration, and more.

Rich Eye-tracking Metrics
Visualization

Publication-quality Chart Output

Pupil position maps, diameter/area/velocity plots, heatmaps, group comparisons, event-related pupil curves — export to jpg/pdf/csv.

Publication-quality Chart Output

Dual Product Lines

Mobile and fixed lines with independent hardware and software — mobile for freely moving paradigms, fixed for high-frame-rate head-fixed experiments.

Shared by Both Products

Both lines share AI pupil detection, synchronized eye and behavior recording, bilingual software, publication-grade export, and TTL multimodal integration — choose mobile or fixed by paradigm.

AI pupil detectionEye-tracking + behavior syncBilingual interfacePublication-quality chart exportTTL multimodal integrationRich eye-tracking metricsAutomated analysis pipeline
Mobile

Freely-moving Mouse Eye-tracking System

Eye-tracking for Freely-moving Mouse

Key Differences

Freely-moving animals

Head-mounted ETU weighs only 1 g — mice freely explore in cage with non-intrusive eye-tracking, ideal for arousal, social, and environment-dependent experiments.

Head-fixed

Head-fixed Mouse Eye-tracking System

Eye-tracking for Head-fixed Mouse

Key Differences

Up to 1000 fps

Up to

Head-fixed with strictly controlled stimulation — ultra-high frame rate captures subtle eye movements, ideal for visual stimulation, PLR, and fine oculomotor response studies.

Product Comparison

Cross-vendor performance comparison: clarity and frame rate — sources noted below each column.

BayONE Life Sciences

Clarity

BayONE Life Sciences eye tracking clarity

Frame Rate

1000fps
Up to

Source

Science Advances, Neuron, 2021

University of Texas

Clarity

University of Texas eye tracking clarity

Frame Rate

30fps

Source

Nature, 2020

Duke University

Clarity

Duke University eye tracking clarity

Frame Rate

30fps

Source

Science, 2020

ETH Zurich

Clarity

ETH Zurich eye tracking clarity

Frame Rate

5fps

Source

Nature Protocols, 2021

Eye Tracking Parameters

Records pupil position, size, velocity, and directional changes; saccade count and amplitude — 100+ metrics with publication-grade export.

01

Pupil Parameters (Position, Size, Velocity)

Outputs time-series pupil position, diameter, and movement velocity with multi-dimensional statistics and chart export.

Pupil positionPupil diameterMovement velocity
02

Pupil Movement by Direction

Parses horizontal and vertical eye displacement, outputting positional trajectories and movement statistics along each axis.

Horizontal/vertical eye positionDirectional displacement statistics
03

Blink Detection & Exclusion

Automatically detects blinks and counts occurrences; optional blink-period exclusion yields more reliable pupil diameter, position, and related metrics.

Blink extractionBlink count statisticsBlink period exclusion

Common Pupil Metrics

Pupil positionPupil diameterPupil areaPupil movement velocity, etc.

Architecture

Mobile and fixed eye-tracking lines — integrated hardware capture and software analysis from recording to publication-ready charts.

Explore capture and analysis software at Animal Eye Tracking Suite.

Mobile eye-tracking

Freely-moving Mouse Eye-tracking System

Eye-tracking System for Freely-moving Mouse

Hardware Components

Control Hub

Control Hub

Acquisition Control Unit

Synchronized eye-tracking and behavior video recording, event marking, and TTL peripheral integration for stable long-duration experiments.

Dual-video synchronizationTTL event synchronizationAutomated recording
ETU Head-mounted Sensor

ETU Head-mounted Sensor

Eye Tracking Unit · Only 1 g

Ultra-light infrared eye-tracking unit with built-in illumination for stable low-light imaging; detachable 0.4 g skull connector, cage-friendly and reusable.

Head-mounted, only 1 gInfrared low-light imagingDetachable connector
Data Analysis Workstation

Data Analysis Workstation

Data Analysis Workstation

Hosts AI pupil detection, batch analysis, and publication-quality chart export with multi-sample parallel processing.

AI batch processingMulti-format exportBilingual interface

Software Platform

Freely-moving Mouse Eye-tracking Acquisition Software

Freely-moving Mouse Eye-tracking Acquisition Software

Eye-tracking Acquisition Software for Freely-moving Mouse

For freely-moving paradigms — synchronized eye-tracking and behavior video recording, experiment configuration, event marking, and TTL peripheral integration.

  • Stable multi-function acquisition: region selection, custom resolution/duration
  • Synchronized eye-tracking and behavior dual-camera recording with precise event marking
  • Time synchronization with Control Hub and TTL peripherals
Eye-tracking + behavior dual-cameraFreely-moving paradigmTTL synchronization
Freely-moving Mouse Eye-tracking Analysis Software

Freely-moving Mouse Eye-tracking Analysis Software

Eye-tracking Analysis Software for Freely-moving Mouse

Built-in AI pupil detection for batch analysis of freely-moving mouse eye-tracking data — one-click publication-quality charts and multi-format export.

  • AI pupil detection: batch multi-sample processing, extracting position/diameter/area/saccade velocity, etc.
  • Trajectory maps, heatmaps, event-related pupil plots, and more
  • Pupil metrics and charts exportable to jpg / pdf / csv
AI detectionPublication-quality chartsBatch analysis
Head-fixed eye-tracking

Head-fixed Mouse Eye-tracking System

Eye-tracking System for Head-fixed Mouse

Optical Acquisition Platform

Optical Acquisition Platform

Optical Acquisition Platform

HD eye-tracking under head fixation up to 1000 fps, eliminating head-motion artifacts; synchronized behavioral camera recording.

1000 fpsHead fixationBehavior camera synchronization
Data Analysis Workstation

Data Analysis Workstation

Data Analysis Workstation

High-performance analysis platform supporting fully automated Capture acquisition and Analyzer analysis pipeline.

High-performance computingFull-pipeline automationBilingual interface
Head-fixed Eye-tracking Capture Software

Head-fixed Eye-tracking Capture Software

Mouse Fixed Eye Capture

Data acquisition software for head-fixed experiments — up to 1000 fps recording with automated parameter configuration.

  • Automated recording with flexible resolution and frame rate selection
  • Real-time eye-tracking preview and calibration
  • Time synchronization with behavior camera and TTL peripherals
1000 fpsAutomated acquisitionReal-time preview
Head-fixed Eye-tracking Analyzer Software

Head-fixed Eye-tracking Analyzer Software

Mouse Fixed Eye Analyzer

Built-in AI pupil detection with integrated data processing and visualization — simple operation for analysis and publication-quality chart export.

  • AI pupil detection with batch multi-sample auto-processing
  • Line plots, scatter plots, heatmaps, and more
  • Export pupil position, diameter, area, movement speed, and other metrics
AI detectionPublication-quality chartsOne-click export

Data Visualization

From AI pupil extraction and multidimensional visualization to event-related analysis, oculomotor behavior, and multimodal integration.

Covers the full pipeline from eye-tracking video recording through annotation and model training to pupil detection. Deep learning delivers stable pupil coordinates under complex lighting, blinks, and head movement.

Automated pupil localization with horizontal/vertical coordinate time series
Batch multi-sample processing for long continuous recordings
Reduced manual annotation cost with improved detection consistency and reproducibility

Transforms raw tracking data into interpretable statistics and charts — time series, spatial distributions, and population summaries for rapid group comparisons.

Pupil diameter/area time series, XY position scatter plots, and gaze heatmaps
Population-level statistics: distribution histograms, probability density curves, etc.
Charts exportable to jpg / pdf / csv for publication requirements

Aligns pupil diameter, area, and related parameters to experimental events to reveal arousal, stress, learning, or pharmacological pupil response patterns.

Event-related mean curves (with SEM/CI) and temporal heatmaps
Pre/post-stimulus comparison and 3D multivariate relationship display
Suitable for time-locked paradigm mechanism analysis and pharmacological evaluation

Combines threshold algorithms and deep learning to automatically detect blinks and other ocular behaviors with timestamps and frequency statistics.

Threshold-based automatic blink event extraction with timeline annotation
AI model identifies complex ocular behaviors with linked video replay
Behavioral dynamics and frequency statistics for mechanism and phenotyping research

Eye-tracking data syncs with freely moving, looming threat, and visual stimulation paradigms plus electrophysiology and optogenetics for comprehensive phenotyping.

Mobile eye-tracking + freely-moving / Looming / visual stimulation paradigms
TTL-synchronized electrophysiology, optogenetics, and other neural recording/modulation
Integrated "pupil–behavior–neural activity" analysis framework
01 Deep Learning-Based Pupil Feature Extraction02 Multidimensional Eye-Tracking Quantification and Visualization03 Event-Related Pupil Parameter Changes04 Pupil-Feature-Based Ocular Behavior Recognition05 Pupil and Multimodal Behavioral Joint Analysis

Application Cases

In neuroscience, psychology, and psychiatry, monitoring eye information via eye tracking is a standard and essential measurement.

Eye Tracking Application Cases

Eye tracking applies across paradigms from basic neural mechanisms to clinical translation.

Typical directions include:

Animal arousal stateNeural mechanismsOphthalmic diseasesLocomotionAutismDiabetesOcular features in gene-edited miceAlzheimer's diseaseParkinson's diseaseNeurodegenerative diseases
Eye tracking application illustration

Studying animal arousal state

Pupil-related arousal broadly influences behavior and brain state — pupil size is commonly used to study animal arousal.

Detection Metrics
Pupil diameter
Experimental Results
Pupil diameter during sleep is smaller than during wakefulness
J. Neuroscience 2022
Studying animal arousal state

Neural mechanisms of sleep in innate fear

This study examined mouse responses to TMT (trimethylthiazoline) exposure during REM sleep and effects on vigilance. Pupil size as a vigilance index increases with enhanced adaptive threat response.

Detection Metrics
Pupil sizepupil movement velocity
Experimental Results
During REM sleep TMT exposure, both pupil size and movement velocity rapidly increased
Science Advances 2021
Neural mechanisms of sleep in innate fear

Pupil changes in autism animal models

Brief flash tests in wild-type dogs show pupil constriction. Mutant dogs exhibit prolonged pupillary light reflex latency and longer time to minimum pupil diameter.

Detection Metrics
Pupil diameterPLR latencyminimum pupil diametertime to minimum diameter
Experimental Results
ASD-related genes affect pupil responses in dogs
Mol. Psychiatry 2023
Pupil changes in autism animal models

Pupil changes in ophthalmic diseases

Assessed pupil area responses in disease model mice under pharmacological intervention, comparing controls and disease models.

Detection Metrics
Pupil area
Experimental Results
Controls showed significant dilation after tropicamide; D2 mice showed no significant pupil area response
Current Eye Research 2022
Pupil changes in ophthalmic diseases

Pupil changes in GO/NOGO paradigm

In Hit and FA trials, mice licked with large pupil dilation; in CR trials, correct NoGo responses without licking showed distinct pupil dynamics. Pupil dynamics became more pronounced with learning.

Detection Metrics
Pupil dynamicsevent-related pupil diameter
Experimental Results
Pupil dynamics accurately distinguish behavioral responses, reflecting choice and learning
Front. Behav. Neurosci. 2016
Pupil changes in GO/NOGO paradigm

Studying mouse saccade behavior

Eye-tracking parsed spontaneous and evoked saccades in head-fixed mice, revealing superior colliculus regulation.

Detection Metrics
Spontaneous saccadesevoked saccades
Experimental Results
Superior colliculus drives stimulus-evoked directionally biased saccades in head-fixed mice
eLife 2021
Studying mouse saccade behavior

Pupil changes in neurodegenerative diseases

In Alzheimer's, Parkinson's, and other neurodegenerative diseases, pupil diameter changes may serve as biomarkers.

Detection Metrics
Pupillary light reflex (PLR)pupil diameterwavelength-specific pupil response
Experimental Results
AD mice show distinct PLR dynamics from WT; PD patients show attenuated red/blue light pupil response differences
Nat. Commun. 2024Front. Med. 2021
Pupil changes in neurodegenerative diseases

User Papers

Mobile and fixed mouse eye-tracking systems support high-impact papers in neural mechanisms, autism, sleep, visual escape, and more.

Start Your EyeTracking Research Journey

Contact us for demos, white papers, and custom multimodal integration solutions